Index

A

active (aragog.phase.PhaseEvaluatorCollection attribute), [1] AdamsWilliamsonEOS (class in aragog.mesh) apply_flux_boundary_conditions() (aragog.core.BoundaryConditions method) apply_flux_inner_boundary_condition() (aragog.core.BoundaryConditions method) apply_flux_outer_boundary_condition() (aragog.core.BoundaryConditions method) apply_temperature_boundary_conditions() (aragog.core.BoundaryConditions method) apply_temperature_boundary_conditions_melt() (aragog.core.BoundaryConditions method) aragog module aragog.core module aragog.interfaces module aragog.mesh module

aragog.output module aragog.parser module aragog.phase module aragog.solver module aragog.utilities module aragog_file_logger() (in module aragog) area (aragog.mesh.FixedMesh attribute) (aragog.mesh.FixedMesh property)

B

basic_density (aragog.mesh.AdamsWilliamsonEOS property) (aragog.mesh.UserDefinedEOS property) basic_density() (aragog.mesh.EOS method) basic_pressure (aragog.mesh.AdamsWilliamsonEOS property) (aragog.mesh.Mesh property) (aragog.mesh.UserDefinedEOS property)

basic_pressure() (aragog.mesh.EOS method) bottom_temperature (aragog.solver.State attribute) (aragog.solver.State property) boundary_conditions (aragog.parser.Parameters attribute) (aragog.solver.Evaluator attribute), [1] BoundaryConditions (class in aragog.core)

C

capacitance_staggered() (aragog.solver.State method) combine_properties() (in module aragog.utilities) complex_formatter() (in module aragog) composite (aragog.phase.PhaseEvaluatorCollection attribute), [1] CompositePhaseEvaluator (class in aragog.phase) conductive_heat_flux() (aragog.solver.State method) conductive_heat_flux_basic (aragog.output.Output property)

ConstantProperty (class in aragog.phase) convective_heat_flux() (aragog.solver.State method) convective_heat_flux_basic (aragog.output.Output property) core_cooling() (aragog.core.BoundaryConditions method) core_mass (aragog.output.Output property) critical_reynolds_number (aragog.solver.State attribute) (aragog.solver.State property)

D

d_dr_at_basic_nodes() (aragog.mesh.Mesh method) debug_logger() (in module aragog) delta_density() (aragog.phase.MixedPhaseEvaluator method) delta_fusion() (aragog.phase.MixedPhaseEvaluator method) delta_mesh (aragog.mesh.FixedMesh attribute) (aragog.mesh.FixedMesh property) delta_specific_volume() (aragog.interfaces.PhaseEvaluatorABC method) (aragog.interfaces.PhaseEvaluatorProtocol method) (aragog.phase.CompositePhaseEvaluator method) (aragog.phase.MixedPhaseEvaluator method) (aragog.phase.SinglePhaseEvaluator method) density() (aragog.interfaces.PhaseEvaluatorABC method) (aragog.interfaces.PhaseEvaluatorProtocol method) (aragog.phase.CompositePhaseEvaluator method) (aragog.phase.MixedPhaseEvaluator method) (aragog.phase.SinglePhaseEvaluator method)

density_basic (aragog.output.Output property) depth (aragog.mesh.FixedMesh attribute) (aragog.mesh.FixedMesh property) dilatation_heating() (aragog.solver.State method) dphidr() (aragog.solver.State method) dTdPs() (aragog.interfaces.PhaseEvaluatorABC method) (aragog.interfaces.PhaseEvaluatorProtocol method) (aragog.phase.CompositePhaseEvaluator method) dTdr (aragog.output.Output property) dTdr() (aragog.solver.State method) dTdrs (aragog.output.Output property) dTdrs() (aragog.interfaces.PhaseEvaluatorABC method) (aragog.interfaces.PhaseEvaluatorProtocol method) (aragog.phase.CompositePhaseEvaluator method) dTdt() (aragog.solver.Solver method) dxidr (aragog.mesh.Mesh property)

E

eddy_diffusivity() (aragog.solver.State method) energy (aragog.parser.Parameters attribute) eos (aragog.mesh.Mesh attribute) EOS (class in aragog.mesh) eval() (aragog.interfaces.PropertyProtocol method) (aragog.phase.ConstantProperty method) (aragog.phase.LookupProperty1D method) (aragog.phase.LookupProperty2D method)

evaluator (aragog.solver.Solver attribute) (aragog.solver.State attribute) Evaluator (class in aragog.solver)

F

filename (aragog.solver.Solver attribute) FixedMesh (class in aragog.mesh)

from_file() (aragog.parser.Parameters class method) (aragog.solver.Solver class method)

G

get_adiabat() (aragog.core.InitialCondition method) get_basic_mass_coordinates_from_spatial_coordinates() (aragog.mesh.Mesh method) get_constant_spacing() (aragog.mesh.Mesh method) get_density() (aragog.mesh.AdamsWilliamsonEOS method) get_density_from_radii() (aragog.mesh.AdamsWilliamsonEOS method) get_dxidr_basic() (aragog.mesh.Mesh method) get_effective_density() (aragog.mesh.AdamsWilliamsonEOS method) get_linear() (aragog.core.InitialCondition method) get_mass_element() (aragog.mesh.AdamsWilliamsonEOS method) get_mass_within_radii() (aragog.mesh.AdamsWilliamsonEOS method) get_mass_within_shell() (aragog.mesh.AdamsWilliamsonEOS method) get_planet_density() (aragog.mesh.Mesh method) get_pressure_from_radii() (aragog.mesh.AdamsWilliamsonEOS method)

get_pressure_gradient() (aragog.mesh.AdamsWilliamsonEOS method) get_radii_from_pressure() (aragog.mesh.AdamsWilliamsonEOS method) get_staggered_spatial_coordinates_from_mass_coordinates() (aragog.mesh.Mesh method) gradient() (aragog.phase.LookupProperty1D method) gravitational_acceleration() (aragog.interfaces.PhaseEvaluatorABC method) (aragog.interfaces.PhaseEvaluatorProtocol method) (aragog.phase.CompositePhaseEvaluator method) (aragog.phase.MixedPhaseEvaluator method) (aragog.phase.SinglePhaseEvaluator method) gravitational_separation_flux (aragog.solver.State attribute) gravitational_separation_heat_flux_basic (aragog.output.Output property) gravitational_separation_mass_flux() (aragog.solver.State method) grey_body() (aragog.core.BoundaryConditions method)

H

heat_capacity() (aragog.interfaces.PhaseEvaluatorABC method) (aragog.interfaces.PhaseEvaluatorProtocol method) (aragog.phase.CompositePhaseEvaluator method) (aragog.phase.MixedPhaseEvaluator method) (aragog.phase.SinglePhaseEvaluator method) heat_capacity_basic (aragog.output.Output property) heat_flux (aragog.solver.State attribute) (aragog.solver.State property) heating (aragog.output.Output property) (aragog.solver.State attribute) (aragog.solver.State property)

heating_dilatation (aragog.output.Output property) (aragog.solver.State property) heating_radio (aragog.output.Output property) (aragog.solver.State attribute) (aragog.solver.State property) heating_tidal (aragog.output.Output property) (aragog.solver.State attribute) (aragog.solver.State property) height (aragog.mesh.FixedMesh attribute) (aragog.mesh.FixedMesh property)

I

initial_condition (aragog.parser.Parameters attribute) (aragog.solver.Evaluator attribute), [1] InitialCondition (class in aragog.core) initialize() (aragog.solver.Solver method) inner_boundary (aragog.mesh.FixedMesh attribute), [1] inviscid_regime (aragog.solver.State attribute) (aragog.solver.State property)

inviscid_velocity (aragog.solver.State attribute) (aragog.solver.State property) is_convective (aragog.solver.State attribute) (aragog.solver.State property) is_file() (in module aragog.utilities) is_monotonic_increasing() (in module aragog.utilities) is_number() (in module aragog.utilities)

K

kinematic_viscosity() (aragog.interfaces.PhaseEvaluatorABC method) (aragog.interfaces.PhaseEvaluatorProtocol method)

L

latent_heat() (aragog.interfaces.PhaseEvaluatorABC method) (aragog.interfaces.PhaseEvaluatorProtocol method) (aragog.phase.CompositePhaseEvaluator method) (aragog.phase.MixedPhaseEvaluator method) (aragog.phase.SinglePhaseEvaluator method) liquid (aragog.phase.PhaseEvaluatorCollection attribute), [1] liquidus() (aragog.interfaces.MixedPhaseEvaluatorProtocol method) (aragog.phase.CompositePhaseEvaluator method) (aragog.phase.MixedPhaseEvaluator method)

liquidus_gradient() (aragog.interfaces.MixedPhaseEvaluatorProtocol method) (aragog.phase.CompositePhaseEvaluator method) (aragog.phase.MixedPhaseEvaluator method) liquidus_K_staggered (aragog.output.Output property) log10_viscosity_basic (aragog.output.Output property) log10_viscosity_staggered (aragog.output.Output property) LookupProperty1D (class in aragog.phase) LookupProperty2D (class in aragog.phase)

M

make_tsurf_event() (aragog.solver.Solver method) mantle_mass (aragog.output.Output property) mass_flux (aragog.solver.State property) mass_radii (aragog.mesh.FixedMesh attribute), [1] mass_radii_km_basic (aragog.output.Output property) mass_radii_km_staggered (aragog.output.Output property) mass_staggered (aragog.output.Output property) melt_fraction() (aragog.interfaces.PhaseEvaluatorABC method) (aragog.interfaces.PhaseEvaluatorProtocol method) (aragog.phase.CompositePhaseEvaluator method) (aragog.phase.MixedPhaseEvaluator method) (aragog.phase.SinglePhaseEvaluator method) melt_fraction_basic (aragog.output.Output property) melt_fraction_global (aragog.output.Output property) melt_fraction_no_clip() (aragog.phase.MixedPhaseEvaluator method) melt_fraction_staggered (aragog.output.Output property) mesh (aragog.parser.Parameters attribute) (aragog.solver.Evaluator attribute), [1] Mesh (class in aragog.mesh) mixed (aragog.phase.PhaseEvaluatorCollection attribute), [1]

MixedPhaseEvaluator (class in aragog.phase) MixedPhaseEvaluatorProtocol (class in aragog.interfaces) mixing_heat_flux_basic (aragog.output.Output property) mixing_length (aragog.mesh.FixedMesh attribute) (aragog.mesh.FixedMesh property) mixing_length_cubed (aragog.mesh.FixedMesh attribute) (aragog.mesh.FixedMesh property) mixing_length_squared (aragog.mesh.FixedMesh attribute) (aragog.mesh.FixedMesh property) mixing_mass_flux() (aragog.solver.State method) module aragog aragog.core aragog.interfaces aragog.mesh aragog.output aragog.parser aragog.phase aragog.solver aragog.utilities

N

name (aragog.phase.ConstantProperty attribute), [1] (aragog.phase.LookupProperty1D attribute), [1] (aragog.phase.LookupProperty2D attribute), [1] ndim (aragog.phase.ConstantProperty attribute), [1] (aragog.phase.LookupProperty1D attribute), [1] (aragog.phase.LookupProperty2D attribute), [1]

number_of_nodes (aragog.mesh.FixedMesh attribute) (aragog.mesh.FixedMesh property)

O

outer_boundary (aragog.mesh.FixedMesh attribute), [1]

Output (class in aragog.output)

P

parameters (aragog.phase.PhaseEvaluatorCollection attribute) (aragog.solver.Solver attribute) (aragog.solver.State attribute) Parameters (class in aragog.parser) phase_basic (aragog.solver.State attribute) phase_liquid (aragog.parser.Parameters attribute) phase_mixed (aragog.parser.Parameters attribute) phase_solid (aragog.parser.Parameters attribute) phase_staggered (aragog.solver.State attribute) PhaseEvaluatorABC (class in aragog.interfaces)

PhaseEvaluatorCollection (class in aragog.phase) PhaseEvaluatorProtocol (class in aragog.interfaces) phases (aragog.solver.Evaluator attribute), [1] plot() (aragog.output.Output method) porosity() (aragog.phase.MixedPhaseEvaluator method) prepare_data_for_spline() (aragog.phase.LookupProperty2D method) pressure (aragog.interfaces.PhaseEvaluatorABC attribute) pressure_GPa_basic (aragog.output.Output property) pressure_GPa_staggered (aragog.output.Output property) profile_decorator() (in module aragog.utilities) PropertyProtocol (class in aragog.interfaces)

Q

quantity_at_basic_nodes() (aragog.mesh.Mesh method)

quantity_at_staggered_nodes() (aragog.mesh.Mesh method)

R

radii (aragog.mesh.FixedMesh attribute), [1] radii_km_basic (aragog.output.Output property) radii_km_staggered (aragog.output.Output property) radiogenic_heating() (aragog.solver.State method) radionuclide_sections() (aragog.parser.Parameters static method) radionuclides (aragog.parser.Parameters attribute) (aragog.solver.Evaluator attribute) (aragog.solver.Evaluator property) relative_velocity() (aragog.interfaces.PhaseEvaluatorABC method) (aragog.interfaces.PhaseEvaluatorProtocol method) (aragog.phase.CompositePhaseEvaluator method) (aragog.phase.MixedPhaseEvaluator method) (aragog.phase.SinglePhaseEvaluator method)

reset() (aragog.solver.Solver method) reynolds_number (aragog.solver.State attribute) (aragog.solver.State property) rheological_front (aragog.output.Output property) root (aragog.solver.Solver attribute)

S

scalings (aragog.parser.Parameters attribute) set_pressure() (aragog.interfaces.PhaseEvaluatorABC method) (aragog.interfaces.PhaseEvaluatorProtocol method) (aragog.phase.CompositePhaseEvaluator method) (aragog.phase.MixedPhaseEvaluator method) set_staggered_pressure() (aragog.mesh.AdamsWilliamsonEOS method) (aragog.mesh.EOS method) (aragog.mesh.UserDefinedEOS method) set_temperature() (aragog.interfaces.PhaseEvaluatorABC method) (aragog.interfaces.PhaseEvaluatorProtocol method) (aragog.phase.CompositePhaseEvaluator method) settings (aragog.mesh.FixedMesh attribute), [1] (aragog.phase.MixedPhaseEvaluator attribute) setup_gravitational_acceleration() (in module aragog.phase) shape_basic (aragog.output.Output property) shape_staggered (aragog.output.Output property) simple_formatter() (in module aragog) SinglePhaseEvaluator (class in aragog.phase) solid (aragog.phase.PhaseEvaluatorCollection attribute), [1] solidus() (aragog.interfaces.MixedPhaseEvaluatorProtocol method) (aragog.phase.CompositePhaseEvaluator method) (aragog.phase.MixedPhaseEvaluator method)

solidus_gradient() (aragog.interfaces.MixedPhaseEvaluatorProtocol method) (aragog.phase.CompositePhaseEvaluator method) (aragog.phase.MixedPhaseEvaluator method) solidus_K_staggered (aragog.output.Output property) solution (aragog.solver.Solver property) solution_top_temperature (aragog.output.Output property) solve() (aragog.solver.Solver method) solver (aragog.parser.Parameters attribute) Solver (class in aragog.solver) staggered_effective_density (aragog.mesh.AdamsWilliamsonEOS property) (aragog.mesh.Mesh property) (aragog.mesh.UserDefinedEOS property) staggered_effective_density() (aragog.mesh.EOS method) staggered_pressure (aragog.mesh.AdamsWilliamsonEOS property) (aragog.mesh.Mesh property) (aragog.mesh.UserDefinedEOS property) staggered_pressure() (aragog.mesh.EOS method) state (aragog.solver.Solver attribute) State (class in aragog.solver) super_adiabatic_temperature_gradient (aragog.solver.State attribute) (aragog.solver.State property) super_adiabatic_temperature_gradient_basic (aragog.output.Output property)

T

tanh_weight() (in module aragog.utilities) temperature (aragog.core.InitialCondition property) (aragog.interfaces.PhaseEvaluatorABC attribute) temperature_basic (aragog.solver.Solver property) (aragog.solver.State attribute) (aragog.solver.State property) temperature_K_basic (aragog.output.Output property) temperature_K_staggered (aragog.output.Output property) temperature_staggered (aragog.solver.Solver property) (aragog.solver.State attribute) (aragog.solver.State property) thermal_conductivity() (aragog.interfaces.PhaseEvaluatorABC method) (aragog.interfaces.PhaseEvaluatorProtocol method) (aragog.phase.CompositePhaseEvaluator method) (aragog.phase.MixedPhaseEvaluator method) (aragog.phase.SinglePhaseEvaluator method)

thermal_expansivity() (aragog.interfaces.PhaseEvaluatorABC method) (aragog.interfaces.PhaseEvaluatorProtocol method) (aragog.phase.CompositePhaseEvaluator method) (aragog.phase.MixedPhaseEvaluator method) (aragog.phase.SinglePhaseEvaluator method) thermal_expansivity_basic (aragog.output.Output property) tidal_heating() (aragog.solver.State method) time_range (aragog.output.Output property) times (aragog.output.Output property) top_temperature (aragog.solver.State attribute) (aragog.solver.State property) total_heat_flux_basic (aragog.output.Output property) total_volume (aragog.mesh.FixedMesh attribute) (aragog.mesh.FixedMesh property)

U

update() (aragog.interfaces.PhaseEvaluatorABC method) (aragog.interfaces.PhaseEvaluatorProtocol method) (aragog.phase.CompositePhaseEvaluator method) (aragog.phase.MixedPhaseEvaluator method) (aragog.solver.State method)

UserDefinedEOS (class in aragog.mesh)

V

value (aragog.phase.ConstantProperty attribute), [1] (aragog.phase.LookupProperty1D attribute), [1] (aragog.phase.LookupProperty2D attribute), [1] viscosity() (aragog.interfaces.PhaseEvaluatorABC method) (aragog.interfaces.PhaseEvaluatorProtocol method) (aragog.phase.CompositePhaseEvaluator method) (aragog.phase.MixedPhaseEvaluator method) (aragog.phase.SinglePhaseEvaluator method)

viscous_regime (aragog.solver.State attribute) (aragog.solver.State property) viscous_velocity (aragog.solver.State attribute) (aragog.solver.State property) volume (aragog.mesh.FixedMesh attribute) (aragog.mesh.FixedMesh property) volume_average() (aragog.mesh.Mesh method)

W

write_at_time() (aragog.output.Output method)